Browse of TCMCG015C05886 protein

CDS

Accession Number	TCMCG015C05886
gbkey	CDS
Protein Id	XP_027096914.1
Location	join(46854437..46854970,46855128..46855408,46855726..46855808,46855901..46856304,46856657..46856850,46856970..46857150,46857344..46857468,46858069..46858158,46858841..46858919,46858999..46859075,46859594..46859702,46860341..46860457)
Gene	LOC113716709
GeneID	113716709
Organism	Coffea arabica

Protein

Length	757aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA506972
db_source	XM_027241113.1
Definition	general transcription and DNA repair factor IIH helicase subunit XPD isoform X1 [Coffea arabica]

EGGNOG-MAPPER Annotation

COG_category	L
Description	DNA repair helicase
KEGG_TC	-
KEGG_Module	M00290        [VIEW IN KEGG]
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko00002        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko03021        [VIEW IN KEGG] ko03400        [VIEW IN KEGG]
KEGG_ko	ko:K10844        [VIEW IN KEGG]
EC	3.6.4.12        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	ko03022        [VIEW IN KEGG] ko03420        [VIEW IN KEGG] map03022        [VIEW IN KEGG] map03420        [VIEW IN KEGG]
GOs	GO:0006139        [VIEW IN EMBL-EBI] GO:0006259        [VIEW IN EMBL-EBI] GO:0006281        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0006950        [VIEW IN EMBL-EBI] GO:0006974        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009266        [VIEW IN EMBL-EBI] GO:0009314        [VIEW IN EMBL-EBI] GO:0009408        [VIEW IN EMBL-EBI] GO:0009411        [VIEW IN EMBL-EBI] GO:0009416        [VIEW IN EMBL-EBI] GO:0009628        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0033554        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044260        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0050896        [VIEW IN EMBL-EBI] GO:0051716        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGAAGTTCCAAATAGAAGACGTGACGGTTTATTTCCCCTACGACAACATCTACCCGGAGCAATATGCATACATGGTGGAACTGAAGCGTGCCCTAGATGCCAAGGGCCACTGCCTTCTAGAGATGCCGACTGGCACCGGTAAAACCATAGCCTTACTTTCCCTCATCACCAGCTACGCACTTTCCAAGCCTTCCAATCCGATCAAGTTCATCTACTGCACTCGCACAGTCCACGAAATGGAGAAAACTTTATCCGAGCTTAAGTTGCTCCACAATTATCAGTTACAACACCTAGGCCCGGCCGCCAAGATCCTTGCCCTAGGTTTATCTTCCAGAAAGAACTTGTGTATTAATCCTACTGTGGTTTCCGCTGAGAATAGAGATTCCGTCGATGCGGCTTGTCGCAAACTTACTGCCAGTTGGGTTCGCGAGCTCGCTGCTGAAAACCCTAGGATTCCGACTTGTTCCTTTTTTGAGAACTACGAGAAGTCTGCTTCTGAAGCCATTCTGCCTCCGGGGGTTTATACCCTGCAGGATCTTAGAGCCTACGGGAAGTTGAAAGGATGGTGCCCATACTTTTTAGCGCGGCACATGGTGCAACTTGCAAATGTGGTGGTTTATAGCTACCAATATTTGCTTGATCCTAAGGTTGCAGGCATTATATCCAAAGAGATGCAGAGAGAATCTGTCGTGGTGTTTGACGAGGCCCACAATATTGATAATGTATGTATTGAGGCTTTGAGTGTCAGTGTGAGGATGCAGACACTCGAAGGGGCTACTAGGAATATCAATAGGATGTCTCAGGAGATAGACAGGTTTAAGGCCACTGATGCTGGTCGACTTCGTGCCGAGTATAACCGACTTGTTGAAGGTTTGGCTCTAAGGGGAGATCTGCCAGCTTCAGATGCCTGGCTAGCAAACCCTGCCTTGCCTAATGATATTCTAAAGGAAGCAGTTCCTGGGAATATAAGGCGGGCAGAGCATTTCTTGTCTGTTCTCCGGAGATTAGTTCAGTATATTAGAGGACGCTTGCAGACTGAAAATGTTGAAAAGGAGGGGCCTGTTGCCTTTGTTGCTTCTGTTAACACTCAAGCTGGAATTGACCAGAAAATGTTGAGATTTTGTTATGACAGGCTTCACTCATTGATGCTAACTCTGGAGATATCCGACACAGATGAATTCTTGCACATACAAACTATTTGTGACTTTGCGACACTTGTGGGAACATATACTCGAGGATTTTCAATTATAATTGAACCTTTTGATGAGAGGATGCCACATATTCCTGACCCAGTGCTGCAGCTATGCTGTCATGATGCTTCTCTTGCCATAAAGCCTGTTTTTGAACGATTTCAATCAGTTGTTATAACTTCTGGGACTCTCAGCCCAATTGATCTTTACCCACGTCTTCTAAATTTTAACCCAGTTGTTAGTCGAAGCTTCACAATGTCCTTGACTAGGGATTGCATATGCCCTATGGTCCTCACACGGGGAAGTGATCAGCTTCCTGTAAGTACGAAGTATGATCTGAGAAGTGATCCTGGTGTTGAAAAAAACTATGGAAAGCTTTTACTGGAAATGGTATCTGTTGTTCCGGATGGAATTGTTTGTTTCTTTGTCAGCTACTCTTACATGGATGGGATAGTCAATAGTTGGCATGAAACAGGTCTTCTGAAGGAAATAATGCAACATAAACTGGTTTTCATCGAGACTCAAGATGTTGTTGAAACCACATTGGCTTTGGACAACTATCGCAAAGCTTGCGATTGTGGAAGAGGAGCTGTCTTTTTCTCAGTTGCGAGGGGCAAAGTTGCAGAAGGTATTGATTTTGATAGGCATTATGGTAGGCTTGTCATCATGTTCGGCGTTCCTTTCCAGTACACATTAAGCAGAATATTGCTTGCAAGATTGGAGTACTTGCGGGATACTTTCCAGATTAAGGAGGGCGATTTTCTGACTTTTGATGCTTTGAGACAAGCTGCTCAATGCGTTGGGCGAGTTATCCGTTCAAAGGCAGATTATGGGATGATGATATTTGCTGACAAGAGGTATAGCCGTCATGACAAGCGCTCTAAGTTACCTGGTTGGATTTTGTCACATTTACGTGATGCACATCTTAACTTGAGTACCGACATGGCTGCGCATATAGCAAGAGAGTTCTTAAGGAAAATGGCTCAGCCATATGATAAAACTGGTGTCATGGGCAAGAAAACCCTTTTGTCAGAGGCAGACTTGGAGAAGATGGGGAATTCCAACCTTGGGGAAATGTTCTGA

Protein:   MKFQIEDVTVYFPYDNIYPEQYAYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYALSKPSNPIKFIYCTRTVHEMEKTLSELKLLHNYQLQHLGPAAKILALGLSSRKNLCINPTVVSAENRDSVDAACRKLTASWVRELAAENPRIPTCSFFENYEKSASEAILPPGVYTLQDLRAYGKLKGWCPYFLARHMVQLANVVVYSYQYLLDPKVAGIISKEMQRESVVVFDEAHNIDNVCIEALSVSVRMQTLEGATRNINRMSQEIDRFKATDAGRLRAEYNRLVEGLALRGDLPASDAWLANPALPNDILKEAVPGNIRRAEHFLSVLRRLVQYIRGRLQTENVEKEGPVAFVASVNTQAGIDQKMLRFCYDRLHSLMLTLEISDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLCCHDASLAIKPVFERFQSVVITSGTLSPIDLYPRLLNFNPVVSRSFTMSLTRDCICPMVLTRGSDQLPVSTKYDLRSDPGVEKNYGKLLLEMVSVVPDGIVCFFVSYSYMDGIVNSWHETGLLKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSRILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMAAHIAREFLRKMAQPYDKTGVMGKKTLLSEADLEKMGNSNLGEMF